The preparation of new phosphorus-centered functional groups for modified oligonucleotides and other natural phosphates

Molecules. 2005 Sep 30;10(9):1048-73. doi: 10.3390/10091048.

Abstract

Efforts to develop synthetic methodologies allowing the preparation of alpha,alpha- difluorophosphonothioates, alpha,alpha-difluorophosphonodithioates, alpha,alpha-difluorophosphono- trithioates, and alpha,alpha-difluorophosphinates are reviewed in the light of applications in the field of modified oligonucleotides and cyclitol phosphates. Two successful approaches have been developed, based either on the addition of phosphorus-centered radicals onto gem-difluoroalkenes or on a process involving the addition of lithiodifluorophosphono- thioates 91 onto a ketone and the subsequent deoxygenation reaction of the adduct. The radical route successfully developed a practical route to alpha,alpha-difluoro-H-phosphinates which proved to be useful intermediates to a variety of phosphate isosters. The ionic route led to the first preparation of phosphonodifluoromethyl analogues of nucleoside- 3'-phosphates.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Crystallography, X-Ray
  • Cyclitols / chemistry
  • Ions
  • Models, Molecular
  • Oligonucleotides / chemistry*
  • Phosphates / chemistry*
  • Phosphorus / chemistry*

Substances

  • Cyclitols
  • Ions
  • Oligonucleotides
  • Phosphates
  • Phosphorus