The aim of this multi-center study was to explore the relationship between missing occlusal units and oral health-related quality of life (OHRQoL) in subjects with the shortened dental arches (SDAs). Subjects with SDAs were recruited consecutively for one month from six university-based prosthodontic clinics. In total, 115 SDA subjects participated (mean age, 58.5 +/- 10.0 yrs; 71% female). The location and number of missing teeth were examined and the number of missing occlusal units was calculated. To evaluate OHRQoL, the Japanese version of the Oral Health Impact Profile (OHIP-J) was administered and the summary score of OHIP-J was calculated. The SDA subjects were categorized depending upon the anterior-posterior lengths of the missing or remaining occlusal units. Regression analyses were performed to investigate 1) the association between missing OU and OHIP-J summary scores and 2) the OHIP-J differences between groups of subjects with various anterior-posterior SDA lengths. The first analyses revealed that one missing OU was significantly related to an increase of 2.1 OHIP-J units (95% CI: 0.6-3.5, P=0.016). The second analysis revealed that subjects who only lost the second molar contact exhibited significantly better OHRQoL than those who lost more teeth (Coefficient: 11.1, 95% CI: 2.8-19.2, P=0.02). Furthermore a statistically significant group difference was observed between the groups with and without the first molar occlusal contact (Coefficient: 12.8, 95% CI: 1.4 to 24.1, P=0.03). These results suggest that missing occlusal units are related to the OHRQoL impairment in subjects with SDAs. They also suggest that the patterns of missing occlusal units are likely to be related to the OHRQoL impairment in SDA subjects with the presence of first molar contact having an important role.