Nitrogen K-edge XANES - an overview of reference compounds used to identify unknown organic nitrogen in environmental samples

J Synchrotron Radiat. 2007 Nov;14(Pt 6):500-11. doi: 10.1107/S0909049507042513. Epub 2007 Oct 13.

Abstract

The chemical nature of soil organic nitrogen (N) is still poorly understood and one-third to one-half of it is typically classified as ;unknown N'. Nitrogen K-edge XANES spectroscopy has been used to develop a systematic overview on spectral features of all major N functions in soil and environmental samples. The absolute calibration of the photon energy was completed using the 1s --> pi* transitions of pure gas-phase N(2). On this basis a library of spectral features is provided for mineral N, nitro N, amino acids, peptides, and substituted pyrroles, pyridines, imidazoles, pyrazoles, pyrazines, pyrimidines and purine bases. Although N XANES was previously considered ;non-destructive', effects of radiation damage were shown for two compound classes and an approach was proposed to minimize it. This new evidence is integrated into a proposal for the evaluation spectra from environmental samples with unknown composition. Thus a basis is laid to develop N K-edge XANES as a complementary standard research method to study the molecular composition and ecological functions of ;unknown N' in soil and the environment.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acids / analysis
  • Environmental Pollutants / analysis*
  • Heterocyclic Compounds, 4 or More Rings / analysis
  • Nitrogen / analysis*
  • Nitrogen Compounds / analysis*
  • Soil / analysis*
  • Spectrum Analysis
  • X-Rays

Substances

  • Amino Acids
  • Environmental Pollutants
  • Heterocyclic Compounds, 4 or More Rings
  • Nitrogen Compounds
  • Soil
  • Nitrogen