Comparative evaluation of three JAK2V617F mutation detection methods

Am J Clin Pathol. 2007 Nov;128(5):865-74. doi: 10.1309/LW7Q3739RBRMBXXP.

Abstract

The correlation of JAK2V617F with a proportion of chronic myeloproliferative disorders has generated numerous studies focused on the development of molecular-based assays for JAK2V617F detection. The current parallel study comparatively evaluated 3 JAK2V617F molecular detection methods. Genomic DNA from blood or bone marrow was assayed by 3 laboratories using allele-specific polymerase chain reaction (AS-PCR) or kit-based restriction fragment length polymorphism methods, which used polyacrylamide gel or capillary electrophoresis analysis. In addition, samples were sequenced in 2 of the laboratories. Results found 100% concordance among the 3 methods, with analytic sensitivities of 5% for both kit methods and 0.01% for AS-PCR. The kitbased assays detect JAK2V617F with equal sensitivity regardless of analysis method, and, despite greater sensitivity of AS-PCR, all 3 methods yielded 100% concordant results for this 36-sample set. Consistent with other reports, direct sequencing was insufficiently sensitive to serve as an initial diagnostic tool for JAK2V617F detection.

Publication types

  • Comparative Study
  • Evaluation Study

MeSH terms

  • Adolescent
  • Adult
  • Aged
  • Aged, 80 and over
  • Alleles
  • Amplified Fragment Length Polymorphism Analysis / methods*
  • Child
  • DNA Mutational Analysis / methods
  • Electrophoresis
  • Female
  • Humans
  • Janus Kinase 2 / blood
  • Janus Kinase 2 / genetics*
  • Male
  • Middle Aged
  • Mutation*
  • Polymorphism, Restriction Fragment Length / genetics*
  • Predictive Value of Tests
  • Reagent Kits, Diagnostic*
  • Reproducibility of Results

Substances

  • Reagent Kits, Diagnostic
  • JAK2 protein, human
  • Janus Kinase 2