Signal transduction pathway modeling using sequences of chromatophore images

IEEE Trans Nanobioscience. 2007 Sep;6(3):210-8. doi: 10.1109/tnb.2007.903480.

Abstract

Extensive research is being done in order to use chromatophore cells as biosensors for various substances. In this paper, a link between the biological aspect of chromatophores and digital image/video processing techniques used for chromatophore characterization is established for this purpose. A model of the Gs--AC--PKA--granule motion-image feature signal transduction pathway is proposed, starting from the concentration of the input ligand and ending in the pigment area extracted from a microscope image. The model extends an existing system biology differential equation based model of the Gs--AC--PKA transduction pathway obtained from the Database of Quantitative Cellular Signaling (DQCS). Examples are presented to demonstrate the effectiveness of the proposed system model.

Publication types

  • Evaluation Study

MeSH terms

  • Biosensing Techniques / methods*
  • Cells, Cultured
  • Chromatophores / cytology*
  • Chromatophores / metabolism*
  • Computer Simulation
  • Image Interpretation, Computer-Assisted / methods*
  • Microscopy, Fluorescence / methods*
  • Microscopy, Video / methods
  • Models, Biological*
  • Signal Transduction / physiology*
  • Subtraction Technique