Using barium ions for heavy-atom derivatization and phasing of xylanase II from Trichoderma longibrachiatum

Acta Crystallogr D Biol Crystallogr. 2007 Sep;63(Pt 9):1025-8. doi: 10.1107/S090744490703418X. Epub 2007 Aug 17.

Abstract

This paper describes the use of barium chloride to produce a heavy-atom derivative of xylanase II crystals from Trichoderma longibrachiatum, which was obtained either by cocrystallization or soaking. SAD phasing led to interpretable electron-density maps that allowed unambiguous chain tracing. In the best case, with a data set collected at 9.5 keV, 88% of the residues were built, with 83% of the side chains assigned. The barium ions are found to mainly interact with main-chain carbonyl groups and water molecules. It is suggested that barium ions could also be used as a potential anomalous scatterer in the quick cryosoaking procedure for phasing.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Barium / chemistry*
  • Crystallography, X-Ray
  • Endo-1,4-beta Xylanases / chemistry*
  • Models, Molecular
  • Protein Conformation
  • Trichoderma / enzymology*

Substances

  • Barium
  • Endo-1,4-beta Xylanases