Role of the individual domains of translation termination factor eRF1 in GTP binding to eRF3

Proteins. 2008 Feb 1;70(2):388-93. doi: 10.1002/prot.21544.

Abstract

Eukaryotic translational termination is triggered by polypeptide release factors eRF1, eRF3, and one of the three stop codons at the ribosomal A-site. Isothermal titration calorimetry shows that (i) the separated MC, M, and C domains of human eRF1 bind to eRF3; (ii) GTP binding to eRF3 requires complex formation with either the MC or M + C domains; (iii) the M domain interacts with the N and C domains; (iv) the MC domain and Mg2+ induce GTPase activity of eRF3 in the ribosome. We suggest that GDP binding site of eRF3 acquires an ability to bind gamma-phosphate of GTP if altered by cooperative action of the M and C domains of eRF1. Thus, the stop-codon decoding is associated with the N domain of eRF1 while the GTPase activity of eRF3 is controlled by the MC domain of eRF1 demonstrating a substantial structural uncoupling of these two activities though functionally they are interrelated.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Calorimetry
  • Codon, Terminator
  • GTP Phosphohydrolases / metabolism
  • Guanosine Triphosphate / metabolism*
  • Humans
  • Peptide Termination Factors / chemistry*
  • Peptide Termination Factors / metabolism*
  • Thermodynamics

Substances

  • Codon, Terminator
  • ETF1 protein, human
  • Peptide Termination Factors
  • peptide-chain-release factor 3
  • Guanosine Triphosphate
  • GTP Phosphohydrolases