siRNA screen of the human signaling proteome identifies the PtdIns(3,4,5)P3-mTOR signaling pathway as a primary regulator of transferrin uptake

Genome Biol. 2007;8(7):R142. doi: 10.1186/gb-2007-8-7-r142.

Abstract

Background: Iron uptake via endocytosis of iron-transferrin-transferrin receptor complexes is a rate-limiting step for cell growth, viability and proliferation in tumor cells as well as non-transformed cells such as activated lymphocytes. Signaling pathways that regulate transferrin uptake have not yet been identified.

Results: We surveyed the human signaling proteome for regulators that increase or decrease transferrin uptake by screening 1,804 dicer-generated signaling small interfering RNAs using automated quantitative imaging. In addition to known transport proteins, we identified 11 signaling proteins that included a striking signature set for the phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4,5)P3)-target of rapamycin (mTOR) signaling pathway. We show that the PI3K-mTOR signaling pathway is a positive regulator of transferrin uptake that increases the number of transferrin receptors per endocytic vesicle without affecting endocytosis or recycling rates.

Conclusion: Our study identifies the PtdIns(3,4,5)P3-mTOR signaling pathway as a new regulator of iron-transferrin uptake and serves as a proof-of-concept that targeted RNA interference screens of the signaling proteome provide a powerful and unbiased approach to discover or rank signaling pathways that regulate a particular cell function.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Endocytosis / drug effects
  • Humans
  • Phosphatidylinositol Phosphates / physiology*
  • Protein Kinases / genetics
  • Protein Kinases / physiology*
  • Protein Transport / drug effects
  • Proteome / genetics
  • Proteome / physiology*
  • Proteomics / methods*
  • RNA Interference
  • RNA, Small Interfering / genetics
  • RNA, Small Interfering / pharmacology
  • Signal Transduction
  • TOR Serine-Threonine Kinases
  • Transfection
  • Transferrin / metabolism*

Substances

  • Phosphatidylinositol Phosphates
  • Proteome
  • RNA, Small Interfering
  • Transferrin
  • phosphatidylinositol 3,4,5-triphosphate
  • Protein Kinases
  • MTOR protein, human
  • TOR Serine-Threonine Kinases