Towards a protocol for solution structure determination of copper(II) proteins: the case of Cu(II)Zn(II) superoxide dismutase

Chembiochem. 2007 Aug 13;8(12):1422-9. doi: 10.1002/cbic.200700006.

Abstract

We have developed an optimized protocol to solve the solution structure of copper(II) proteins. After assignment, proton-proton NOEs are used for the shell where 1H spectra are conveniently observed. In a shell closer to the metal ion, 13C NMR spectra with band-selective homonuclear decoupling provide the assignment of all nuclei except for those of the metal ligands. A convenient method for the measurement of 13C longitudinal-relaxation rates (R1) of carbonyls and carboxylate moieties is proposed. 1H NOEs and 1H and 13C R1 data are sufficient to produce a good/reasonable solution structure, as demonstrated for a monomeric species of superoxide dismutase, a 153-residue protein.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Copper* / chemistry
  • Magnetic Resonance Spectroscopy
  • Proteins
  • Protons
  • Superoxide Dismutase* / chemistry
  • Zinc / chemistry

Substances

  • Proteins
  • Protons
  • Copper
  • Superoxide Dismutase
  • Zinc