LINE-1 ORF1 protein localizes in stress granules with other RNA-binding proteins, including components of RNA interference RNA-induced silencing complex

Mol Cell Biol. 2007 Sep;27(18):6469-83. doi: 10.1128/MCB.00332-07. Epub 2007 Jun 11.

Abstract

LINE-1 retrotransposons constitute one-fifth of human DNA and have helped shape our genome. A full-length L1 encodes a 40-kDa RNA-binding protein (ORF1p) and a 150-kDa protein (ORF2p) with endonuclease and reverse transcriptase activities. ORF1p is distinctive in forming large cytoplasmic foci, which we identified as cytoplasmic stress granules. A phylogenetically conserved central region of the protein is critical for wild-type localization and retrotransposition. Yeast two-hybrid screens revealed several RNA-binding proteins that coimmunoprecipitate with ORF1p and colocalize with ORF1p in foci. Two of these proteins, YB-1 and hnRNPA1, were previously reported in stress granules. We identified additional proteins associated with stress granules, including DNA-binding protein A, 9G8, and plasminogen activator inhibitor RNA-binding protein 1 (PAI-RBP1). PAI-RBP1 is a homolog of VIG, a part of the Drosophila melanogaster RNA-induced silencing complex (RISC). Other RISC components, including Ago2 and FMRP, also colocalize with PAI-RBP1 and ORF1p. We suggest that targeting ORF1p, and possibly the L1 RNP, to stress granules is a mechanism for controlling retrotransposition and its associated genetic and cellular damage.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Cell Line
  • Cell Line, Tumor
  • Cytoplasmic Granules / metabolism*
  • Green Fluorescent Proteins / metabolism
  • Humans
  • Kidney / cytology
  • Long Interspersed Nucleotide Elements / genetics*
  • Molecular Weight
  • Open Reading Frames / genetics*
  • Osteosarcoma / pathology
  • Precipitin Tests
  • RNA / metabolism*
  • RNA Interference
  • RNA-Binding Proteins / chemistry
  • RNA-Binding Proteins / metabolism*
  • RNA-Induced Silencing Complex / genetics
  • Retroelements
  • Two-Hybrid System Techniques

Substances

  • RNA-Binding Proteins
  • RNA-Induced Silencing Complex
  • Retroelements
  • Green Fluorescent Proteins
  • RNA