[Detection of short tandem repeat (STR) polymorphisms by microchip electrophoresis for individual identification of cattle]

Shokuhin Eiseigaku Zasshi. 2006 Dec;47(6):263-7. doi: 10.3358/shokueishi.47.263.
[Article in Japanese]

Abstract

A simple and rapid detection of short tandem repeat (STR) markers was studied as a screening test for individual identification of cattle. DNAs were extracted from eight commercial beef samples by a proteinase K-boil method followed by purification with 2-propanol precipitation. Five STR markers, known to be highly polymorphic, were amplified by PCR and analyzed both by a conventional sequencing analysis (SEQ) and by a proposed microchip electrophoresis (MEP). Every marker revealed high polymorphism, such as 5-9 alleles in SEQ analysis, and 4-6 alleles in MEP analysis. This simple and rapid MEP analysis is expected to be an effective screening tool with use of confirmatory SEQ analysis.

Publication types

  • English Abstract

MeSH terms

  • Animal Identification Systems / methods*
  • Animals
  • Cattle / genetics*
  • DNA / genetics
  • Electrophoresis, Microchip*
  • Genetic Markers*
  • Microsatellite Repeats / genetics*
  • Polymerase Chain Reaction
  • Polymorphism, Genetic*
  • Sequence Analysis, DNA / methods

Substances

  • Genetic Markers
  • DNA