Screening marine fungi for inhibitors of the C4 plant enzyme pyruvate phosphate dikinase: unguinol as a potential novel herbicide candidate

Appl Environ Microbiol. 2007 Mar;73(6):1921-7. doi: 10.1128/AEM.02479-06. Epub 2007 Jan 12.

Abstract

A total of 2,245 extracts, derived from 449 marine fungi cultivated in five types of media, were screened against the C(4) plant enzyme pyruvate phosphate dikinase (PPDK), a potential herbicide target. Extracts from several fungal isolates selectively inhibited PPDK. Bioassay-guided fractionation of one isolate led to the isolation of the known compound unguinol, which inhibited PPDK with a 50% inhibitory concentration of 42.3 +/- 0.8 muM. Further kinetic analysis revealed that unguinol was a mixed noncompetitive inhibitor of PPDK with respect to the substrates pyruvate and ATP and an uncompetitive inhibitor of PPDK with respect to phosphate. Unguinol had deleterious effects on a model C(4) plant but no effect on a model C(3) plant. These results indicate that unguinol inhibits PPDK via a novel mechanism of action which also translates to an herbicidal effect on whole plants.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • DNA, Fungal / chemistry
  • DNA, Fungal / genetics
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / genetics
  • DNA, Ribosomal Spacer / chemistry
  • DNA, Ribosomal Spacer / genetics
  • Digitaria / drug effects
  • Enzyme Inhibitors / isolation & purification*
  • Enzyme Inhibitors / pharmacology*
  • Fungi / classification
  • Fungi / isolation & purification
  • Fungi / metabolism*
  • Herbicides / isolation & purification*
  • Herbicides / pharmacology*
  • Heterocyclic Compounds, 3-Ring / isolation & purification*
  • Heterocyclic Compounds, 3-Ring / pharmacology*
  • Hordeum / drug effects
  • Kinetics
  • Molecular Sequence Data
  • Phylogeny
  • Protein Binding
  • Pyruvate, Orthophosphate Dikinase / antagonists & inhibitors*
  • RNA, Ribosomal, 18S / genetics
  • Sequence Analysis, DNA

Substances

  • DNA, Fungal
  • DNA, Ribosomal
  • DNA, Ribosomal Spacer
  • Enzyme Inhibitors
  • Herbicides
  • Heterocyclic Compounds, 3-Ring
  • RNA, Ribosomal, 18S
  • unguinol
  • Pyruvate, Orthophosphate Dikinase

Associated data

  • GENBANK/EF067336
  • GENBANK/EF067337