Glycerol nucleoside triphosphates: synthesis and polymerase substrate activities

Org Lett. 2006 Nov 9;8(23):5345-7. doi: 10.1021/ol062232u.

Abstract

[Structure: see text] The synthesis of (S)-glycerol nucleoside triphosphates (gNTPs) and the analysis of their substrate activities for enzymatic polymerization is described. NTPs with simplified carbohydrate backbones such as the tNTPs (alpha-L-threose-NTPs) are polymerase substrates and offer the potential to create non-natural aptamer sequences with simplified backbones through enzymatic means. The acyclic (S)-GNA was modeled after the shortened alpha-threofuranosyl backbone. Here we describe the synthesis of (S)-glycerol NTPs and initial enzymatic testing of this further simplified nucleic acid backbone.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • DNA-Directed DNA Polymerase / metabolism*
  • Glycerol / chemistry*
  • Molecular Structure
  • Nucleosides / chemistry*
  • Substrate Specificity

Substances

  • Nucleosides
  • DNA-Directed DNA Polymerase
  • Glycerol