Characterization of HLA-B*5516, -B*1313, -B*9512, and -DRB1*1457 alleles identified in a southwest Chinese population

Tissue Antigens. 2006 Oct;68(4):339-43. doi: 10.1111/j.1399-0039.2006.00669.x.

Abstract

The human leukocyte antigen (HLA)-B*5516 allele differs from the B*5502 by a single 97 T --> C substitution (His to Tyr at position 33) in exon 2. The B*1313 allele results from 419 T --> A and 420 A --> C substitutions, encoding a Leu to Tyr substitution at 140 in exon 2 of the B*1301 allele. The B*9512 allele differs from B*1502 by a single 360 G --> C substitution (Gln to His at 120) in exon 3. The DRB1*1457 allele appears to be a hybrid molecule generated by recombination between the DRB1*13 and DRB1*14 alleles. The serological equivalents of these new alleles are HLA-B22, -B13, -B15, and DR13, respectively. Family studies detected two rare haplotypes: A*11, B*9512, DRB1*14 and A*24, B*52, Cw*07, DRB1*1457, DRB3*020201, DQB1*050301. The gene frequencies of these alleles in the Chinese population are less than 0.0001.

MeSH terms

  • Alleles*
  • Amino Acid Sequence
  • Antibodies / blood
  • Antibody Specificity / genetics
  • Asian People / genetics
  • Cytotoxicity Tests, Immunologic
  • Epitopes / genetics
  • Epitopes / immunology
  • Genotype
  • HLA-B Antigens / blood
  • HLA-B Antigens / genetics*
  • HLA-B Antigens / immunology
  • HLA-DR Antigens / blood
  • HLA-DR Antigens / genetics*
  • HLA-DR Antigens / immunology
  • HLA-DRB1 Chains
  • Humans
  • Molecular Sequence Data
  • Sequence Analysis, DNA

Substances

  • Antibodies
  • Epitopes
  • HLA-B Antigens
  • HLA-DR Antigens
  • HLA-DRB1 Chains

Associated data

  • GENBANK/AJ966345
  • GENBANK/AY339847
  • GENBANK/AY505490
  • GENBANK/DQ235685
  • GENBANK/DQ364132
  • GENBANK/DQ390460