Sequence determination of lychnin, a type 1 ribosome-inactivating protein from Lychnis chalcedonica seeds

Biol Chem. 2006 Sep;387(9):1261-6. doi: 10.1515/BC.2006.156.

Abstract

The complete amino acid sequence of lychnin, a type 1 ribosome-inactivating protein (RIP) isolated from Lychnis chalcedonica seeds, has been determined by automated Edman degradation and ESI-QTOF mass spectrometry. Lychnin consists of 234 amino acid residues with a molecular mass of 26 131.14 Da. All amino acid residues involved in the formation of the RIP active site (Tyr69, Tyr119, Glu170, Arg173 and Trp203) are fully conserved. Furthermore, a fast MALDI-TOF experiment showed that two out of three cysteinyl residues (Cys32 and Cys115) form a disulfide bridge, while Cys214 is in the thiol form, which makes it suitable for linking carrier molecules to generate immunotoxins and other conjugates.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Autoanalysis / methods*
  • Lychnis / chemistry*
  • Mass Spectrometry / methods*
  • Molecular Sequence Data
  • Molecular Weight
  • Ribosome Inactivating Proteins / chemistry*
  • Ribosome Inactivating Proteins / isolation & purification
  • Ribosome Inactivating Proteins, Type 1 / chemistry*
  • Ribosome Inactivating Proteins, Type 1 / isolation & purification
  • Seeds / chemistry*
  • Sequence Analysis, Protein / methods*

Substances

  • Ribosome Inactivating Proteins, Type 1
  • lychnin
  • Ribosome Inactivating Proteins