One-step purification of bacterially expressed recombinant transducin alpha-subunit and isotopically labeled PDE6 gamma-subunit for NMR analysis

Protein Expr Purif. 2007 Feb;51(2):187-97. doi: 10.1016/j.pep.2006.07.012. Epub 2006 Jul 22.

Abstract

Interactions between the transducin alpha-subunit (Galpha(t)) and the cGMP phosphodiesterase gamma-subunit (PDEgamma) are critical not only for turn-on but also turn-off of vertebrate visual signal transduction. Elucidation of the signaling mechanisms dominated by these interactions has been restrained by the lack of atomic structures for full-length Galpha(t)/PDEgamma complexes, in particular, the signaling-state complex represented by Galpha(t).GTPgammaS/PDEgamma. As a preliminary step in our effort for NMR structural analysis of Galpha(t)/PDEgamma interactions, we have developed efficient protocols for the large-scale production of recombinant Galpha(t) (rGalpha(t)) and homogeneous and functional isotopically labeled PDEgamma from Escherichia coli cells. One-step purification of rGalpha(t) was achieved through cobalt affinity chromatography in the presence of glycerol, which effectively removed the molecular chaperone DnaK that otherwise persistently co-purified with rGalpha(t). The purified rGalpha(t) was found to be functional in GTPgammaS/GDP exchange upon activation of rhodopsin and was used to form a signaling-state complex with labeled PDEgamma, rGalpha(t). GTPgammaS/[U-13C,15N]PDEgamma. The labeled PDEgamma sample yielded a well-resolved 1H-15N HSQC spectrum. The methods described here for large-scale production of homogeneous and functional rGalpha(t) and isotope-labeled PDEgamma should support further NMR structural analysis of the rGalpha(t)/PDEgamma complexes. In addition, our protocol for removing the co-purifying DnaK contaminant may be of general utility in purifying E. coli-expressed recombinant proteins.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Carbon Isotopes
  • Chromatography, Affinity
  • Cyclic Nucleotide Phosphodiesterases, Type 6
  • Escherichia coli / metabolism
  • Escherichia coli Proteins / isolation & purification
  • Glycerol / pharmacology
  • Guanosine 5'-O-(3-Thiotriphosphate) / metabolism
  • HSP70 Heat-Shock Proteins / isolation & purification
  • Isotope Labeling
  • Molecular Sequence Data
  • Nitrogen Isotopes
  • Nuclear Magnetic Resonance, Biomolecular
  • Phosphoric Diester Hydrolases / isolation & purification*
  • Phosphoric Diester Hydrolases / metabolism
  • Recombinant Proteins / isolation & purification
  • Recombinant Proteins / metabolism
  • Signal Transduction
  • Transducin / isolation & purification*
  • Transducin / metabolism

Substances

  • Carbon Isotopes
  • Escherichia coli Proteins
  • HSP70 Heat-Shock Proteins
  • Nitrogen Isotopes
  • Recombinant Proteins
  • Guanosine 5'-O-(3-Thiotriphosphate)
  • Phosphoric Diester Hydrolases
  • Cyclic Nucleotide Phosphodiesterases, Type 6
  • dnaK protein, E coli
  • Transducin
  • Glycerol