Isolation and partial characterization of a novel porcine astrovirus

Vet Microbiol. 2006 Oct 31;117(2-4):276-83. doi: 10.1016/j.vetmic.2006.06.020. Epub 2006 Aug 1.

Abstract

Astroviral infection has been described as one of the causes of porcine diarrhoeal disease. Here we describe the detection of astrovirus-like particles by electron microscopy in a diarrhoeal specimen. Furthermore, a cytopathic virus was isolated and propagated in an established porcine kidney cell line, PK-15. Reverse transcription and PCR performed with astrovirus-specific primers amplified a product with the expected size. Sequencing of the PCR product revealed that the virus observed by electron microscopy and propagated in the porcine cell line is an astrovirus, showing 86% identity at the nucleotide level with the only known porcine astrovirus, PAstV. Phylogenetic analysis clustered the novel isolate, Sb4685, together with PAstV in a broad clade comprising mammalian astroviruses.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Astroviridae / classification
  • Astroviridae / isolation & purification*
  • Astroviridae / ultrastructure
  • Astroviridae Infections / veterinary*
  • Base Sequence
  • Cell Line
  • Cluster Analysis
  • Diarrhea / veterinary
  • Diarrhea / virology
  • Gene Amplification
  • Microscopy, Electron / veterinary
  • Molecular Weight
  • Phylogeny
  • RNA, Viral / chemistry
  • Reverse Transcriptase Polymerase Chain Reaction / veterinary
  • Sequence Alignment
  • Sequence Homology, Nucleic Acid
  • Swine

Substances

  • RNA, Viral