Paenibacillus pasadenensis sp. nov. and Paenibacillus barengoltzii sp. nov., isolated from a spacecraft assembly facility

Int J Syst Evol Microbiol. 2006 Jul;56(Pt 7):1509-1514. doi: 10.1099/ijs.0.64085-0.

Abstract

Two novel spore-forming, Gram-positive, mesophilic, heterotrophic bacteria representing two novel species were isolated from the Jet Propulsion Laboratory Spacecraft Assembly Facility (JPL-SAF) at Pasadena, CA, USA. The incidence of similar strains was examined by screening the growing collection of isolates ( approximately 400 strains) obtained from the JPL-SAF using species-specific PCR primer sets designed from the 16S rRNA gene sequences of strains SAFN-016(T) and SAFN-007(T). Phylogenetic analysis of 16S rRNA gene sequences placed these novel isolates within the genus Paenibacillus. Two strains, SAFN-016(T) and SAFN-125, shared 98 % 16S rRNA gene sequence similarity with Paenibacillus timonensis and 97 % similarity with Paenibacillus macerans. Strain SAFN-007(T) showed 95.2 % 16S rRNA gene sequence similarity with Paenibacillus kobensis, its nearest phylogenetic neighbour. The results of DNA-DNA hybridization, physiological tests and biochemical analysis allowed genotypic and phenotypic differentiation of the isolates from currently recognized Paenibacillus species. Strain SAFN-007(T) and strains SAFN-016(T) and SAFN-125 are representatives of two separate novel species, for which the names Paenibacillus pasadenensis sp. nov. (type strain SAFN-007(T)=ATCC BAA-1211(T)=NBRC 101214(T)) and Paenibacillus barengoltzii sp. nov. (type strain SAFN-016(T)=ATCC BAA-1209(T)=NBRC 101215(T)) are proposed.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Bacterial Typing Techniques
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / genetics
  • Environment, Controlled*
  • Environmental Microbiology
  • Genes, rRNA
  • Gram-Positive Bacteria / classification*
  • Gram-Positive Bacteria / cytology
  • Gram-Positive Bacteria / genetics
  • Gram-Positive Bacteria / isolation & purification*
  • Gram-Positive Bacteria / physiology
  • Molecular Sequence Data
  • Nucleic Acid Hybridization
  • Phylogeny
  • RNA, Bacterial / genetics
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Sequence Homology, Nucleic Acid
  • Spacecraft*
  • Spores, Bacterial
  • United States

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • RNA, Bacterial
  • RNA, Ribosomal, 16S

Associated data

  • GENBANK/AB045094
  • GENBANK/AJ320493
  • GENBANK/AY167800
  • GENBANK/AY167814
  • GENBANK/AY167820
  • GENBANK/AY167825
  • GENBANK/AY323610
  • GENBANK/DQ124699
  • GENBANK/DQ124700
  • GENBANK/DQ124701