Molecular cloning and characterization of a rice blast-inducible RING-H2 type zinc finger gene

DNA Seq. 2006 Feb;17(1):41-8. doi: 10.1080/10425170500476509.

Abstract

A novel blast-inducible RING-H2 type zinc finger protein gene OsRING-1 was cloned from rice by cDNA library screening. OsRING-1 is 1670 bp in length and encodes a 46.6 kDa basic protein with two transmembrane (TM) domains, a basic domain (BD), a conserved domain (CD), a RING finger domain and a serine rich (S-rich) domain. By database search, OsRING-1 was mapped on chromosome 2 and clustered together with other six zinc finger genes. The promoter sequence analysis of OsRING-1 gene revealed that some ABA, GA, ethylene, wound, drought, heat stress and pathogen infection responsive elements were found within the OsRING-1 promoter region. Northern analysis showed that OsRING-1 was induced in different degree by pathogen infections, SA, ABA, JA and ethephon (ET) treatments. Tissue expression analysis showed that OsRING-1 was constitutively strongly expressed in roots, but faintly in stems, leaves and sheaths. Taken together, OsRING-1, as a novel C3H2C3-type zinc finger protein involved in many stress responses in rice might plays a role as a transcription regulator in plant stress response signal transduction pathways.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Motifs
  • Amino Acid Sequence
  • Base Sequence
  • Chromosome Mapping
  • Cloning, Molecular
  • DNA, Complementary / isolation & purification
  • DNA-Binding Proteins / genetics*
  • Gene Expression Profiling
  • Gene Expression Regulation, Plant
  • Genes, Plant
  • Magnaporthe / pathogenicity
  • Molecular Sequence Data
  • Oryza / genetics*
  • Plant Proteins / genetics
  • Sequence Alignment
  • Sequence Analysis
  • Zinc Fingers / genetics*

Substances

  • DNA, Complementary
  • DNA-Binding Proteins
  • Plant Proteins
  • pathogenesis-related proteins, plant