An inducible T7 RNA polymerase-dependent plasmid system

Mol Biotechnol. 2006 May;33(1):13-21. doi: 10.1385/mb:33:1:13.

Abstract

RNA interference (RNAi) has become a powerful tool for the specific silencing of gene transcription. Especially the targeting of genes in mammalian cells has been greatly improved by generating plasmid based and viral vector-based systems. This permits expression of short hairpin RNA (shRNA) on a longterm basis. However, an inducible expression of shRNA is required, if the target is essential for cell survival. We developed a doxycycline-inducible two-plasmid system for the expression of a ribozyme-processed shRNA. In contrast to other existing systems, we use the highly specific T7 phage RNA polymerase, which does not interact with cellular factors; therefore, interference with cellular functions is limited. One plasmid is responsible for doxycycline-dependent expression of T7 RNA polymerase and a second plasmid expresses a ribozyme-processed shRNA under the control of a T7 promoter. Our results showed that doxycycline- dependent expression of T7 RNA polymerase was tightly controlled and expression of an shRNA against firefly luciferase inhibited 86% of luciferase activity. In conclusion, our plasmid system provides a very useful tool for analyzing essential gene functions in vitro.

MeSH terms

  • Base Sequence
  • DNA-Directed RNA Polymerases / genetics*
  • DNA-Directed RNA Polymerases / metabolism*
  • Doxycycline / pharmacology
  • Gene Expression* / drug effects
  • Genes, Reporter / genetics
  • HeLa Cells
  • Humans
  • Molecular Sequence Data
  • Plasmids / genetics*
  • RNA / biosynthesis
  • RNA / genetics
  • RNA, Catalytic / metabolism
  • Viral Proteins / genetics*
  • Viral Proteins / metabolism*

Substances

  • RNA, Catalytic
  • Viral Proteins
  • RNA
  • bacteriophage T7 RNA polymerase
  • DNA-Directed RNA Polymerases
  • Doxycycline