The groundwater petroleum contaminant biodegradation effect by high efficient hybrid microorganism was. investigated and the groundwater contaminant biodegradation transportation mathematical model was established in this study. The high efficient bacteria was separated and filtrated from the soil contaminated by petroleum hydrocarbon, and it was identified as Pseudomonas, Flavobacterium and Micrococcus. The petroleum degradation rates by these three kinds microorganism were 62%, 56% and 62% respectively in 24 h, and the high petroleum biodegradation rate 85% could be achieved by the hybrid microorganism constituted by these three kinds of microorganism, which was higher than that of any other each single bacteria community. The hybrid microorganism in-flowed into the reactor imitating the aquifer media with the petroleum wastewater, and it could form a steady microorganism zone in the foreside of the reactor. The petroleum biodegradation rate could achieve 60% when the petroleum wastewater flowed through this microorganism zone and the average petroleum biodegradation rate could reach up to 90% in the effluent. The groundwater contaminant biodegradation transportation mathematical model can predict the biodegradation of the wastewater through the microorganism zone effectively, of which the calculating values have good relativity with those of measurement.