Characterization of rhizobia isolated from Albizia spp. in comparison with microsymbionts of Acacia spp. and Leucaena leucocephala grown in China

Syst Appl Microbiol. 2006 Sep;29(6):502-17. doi: 10.1016/j.syapm.2005.12.010. Epub 2006 Jan 10.

Abstract

This is the first systematic study of rhizobia associated with Albizia trees. The analyses of PCR-RFLP and sequencing of 16S rRNA genes, SDS-PAGE of whole-cell proteins and clustering of phenotypic characters grouped the 31 rhizobial strains isolated from Albizia into eight putative species within the genera Bradyrhizobium, Mesorhizobium and Rhizobium. Among these eight rhizobial species, five were unique to Albizia and the remaining three were shared with Acacia and Leucaena, two legume trees coexisting with Albizia in China. These results indicated that Albizia species nodulate with a wide range of rhizobial species and had preference of microsymbionts different from Acacia and Leucaena. The definition of four novel groups, Mesorhizobium sp., Rhizobium sp. I, Rhizobium sp. II and "R. giardinii", indicates that further studies with enlarged rhizobial population are necessary to better understand the diversity and to clarify the taxonomic relationships of Albizia-associated rhizobia.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acacia / microbiology
  • Albizzia / microbiology*
  • Bacterial Proteins / analysis
  • Bacterial Proteins / isolation & purification
  • Biodiversity
  • China
  • Cluster Analysis
  • DNA Fingerprinting
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / genetics
  • Electrophoresis, Polyacrylamide Gel
  • Genes, rRNA
  • Molecular Sequence Data
  • Phylogeny
  • Polymorphism, Restriction Fragment Length
  • Proteome / analysis
  • Proteome / isolation & purification
  • RNA, Bacterial / genetics
  • RNA, Ribosomal, 16S / genetics
  • Rhizobiaceae / chemistry
  • Rhizobiaceae / classification*
  • Rhizobiaceae / genetics
  • Rhizobiaceae / isolation & purification*
  • Sequence Analysis, DNA
  • Sequence Homology, Nucleic Acid

Substances

  • Bacterial Proteins
  • DNA, Bacterial
  • DNA, Ribosomal
  • Proteome
  • RNA, Bacterial
  • RNA, Ribosomal, 16S

Associated data

  • GENBANK/DQ100057
  • GENBANK/DQ100058
  • GENBANK/DQ100059
  • GENBANK/DQ100061
  • GENBANK/DQ100062
  • GENBANK/DQ100063
  • GENBANK/DQ100064
  • GENBANK/DQ100065
  • GENBANK/DQ100066
  • GENBANK/DQ100067
  • GENBANK/DQ100068