The dazzling array of basal branches in the mtDNA macrohaplogroup M from India as inferred from complete genomes

Mol Biol Evol. 2006 Mar;23(3):683-90. doi: 10.1093/molbev/msj078. Epub 2005 Dec 16.

Abstract

Many efforts based on complete mitochondrial DNA (mtDNA) genomes have been made to depict the global mtDNA landscape, but the phylogeny of Indian macrohaplogroup M has not yet been resolved in detail. To fill this lacuna, we took the same strategy as in our recent analysis of Indian mtDNA macrohaplogroup N and selected 56 mtDNAs from over 1,200 samples across India for complete sequencing, with the intention to cover all Indian autochthonous M lineages. As a result, the phylogenetic status of previously identified haplogroups based on control-region and/or partial coding-region information, such as M2, M3, M4, M5, M6, M30, and M33, was solidified or redefined here. Moreover, seven novel basal M haplogroups (viz., M34-M40) were identified, and yet another five singular branches of the M phylogeny were discovered in the present study. The comparison of matrilineal components among India, East Asia, Southeast Asia, and Oceania at the deepest level yielded a star-like and nonoverlapping pattern, reflecting a rapid mode of modern human dispersal along the Asian coast after the initial "out-of-Africa" event.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • DNA, Mitochondrial* / classification
  • DNA, Mitochondrial* / genetics
  • Ethnicity / genetics*
  • Genetic Variation
  • Genetics, Population
  • Genome, Human*
  • Haplotypes*
  • Humans
  • India
  • Molecular Sequence Data
  • Phylogeny
  • Sequence Analysis, DNA*

Substances

  • DNA, Mitochondrial

Associated data

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