Tapping the Protein Data Bank for crystallization information

Acta Crystallogr D Biol Crystallogr. 2005 Dec;61(Pt 12):1662-9. doi: 10.1107/S0907444905033202. Epub 2005 Nov 19.

Abstract

A database application has been developed for the collection of crystallographic information. This database (the BDP) has been populated with the information found in the Protein Data Bank (PDB). The tool has been used to store crystallization data parsed out of the PDB and these data may be used to extend the crystallization information found in the Biological Macromolecule Crystallization Database (BMCD) and could be used to refine crystallization methodology. A standard is proposed for describing a crystallization experiment that will ease future crystallization data collations and analyses.

MeSH terms

  • Ammonium Sulfate
  • Crystallization / methods*
  • Crystallography, X-Ray
  • Database Management Systems*
  • Databases, Factual / standards
  • Databases, Protein* / standards
  • Polyethylene Glycols
  • Terminology as Topic

Substances

  • Polyethylene Glycols
  • Ammonium Sulfate