Effect of fixation to the degradation of nuclear and mitochondrial DNA in different tissues

J Histochem Cytochem. 2006 Mar;54(3):371-4. doi: 10.1369/jhc.5B6726.2005. Epub 2005 Oct 31.

Abstract

Samples of different tissues were preserved in seven fixatives for periods of time extending from 1 to 336 days, to determine which fixatives reduce the time-dependent degradation of DNA and preserve the histological structure. To achieve these results, three PCR systems were used: FGA and TC11 (both for nuclear DNA) and HV1 for mitochondrial DNA (mt-DNA). For long-term storage in combination with amplification of nuclear and mt-DNA, consistent results were obtained in Carnoy's solution and glutaraldehyde. Variable results were observed for buffered formalin; an mt-DNA product could be detected even after 3 months of fixation. In regard to comparison of the different tissues, the quantities recovered from skeletal muscles and kidneys were higher than from other tissues.

MeSH terms

  • Acetic Acid
  • Adult
  • Brain Chemistry
  • Cell Nucleus / genetics*
  • Chloroform
  • DNA / analysis*
  • DNA, Mitochondrial / analysis
  • Ethanol
  • Fixatives*
  • Glutaral
  • Humans
  • Kidney / chemistry
  • Liver / chemistry
  • Muscle, Skeletal / chemistry
  • Myocardium / chemistry
  • Organ Specificity
  • Polymerase Chain Reaction
  • Time Factors
  • Tissue Fixation / methods*

Substances

  • Carnoy's solution
  • DNA, Mitochondrial
  • Fixatives
  • Ethanol
  • Chloroform
  • DNA
  • Acetic Acid
  • Glutaral