A phenomenological approach to the simulation of metabolism and proliferation dynamics of large tumour cell populations

Phys Biol. 2005 Mar;2(1):8-22. doi: 10.1088/1478-3967/2/1/002.

Abstract

A major goal of modern computational biology is to simulate the collective behaviour of large cell populations starting from the intricate web of molecular interactions occurring at the microscopic level. In this paper we describe a simplified model of cell metabolism, growth and proliferation, suitable for inclusion in a multicell simulator, now under development (Chignola R and Milotti E 2004 Physica A 338 261-6). Nutrients regulate the proliferation dynamics of tumour cells which adapt their behaviour to respond to changes in the biochemical composition of the environment. This modelling of nutrient metabolism and cell cycle at a mesoscopic scale level leads to a continuous flow of information between the two disparate spatiotemporal scales of molecular and cellular dynamics that can be simulated with modern computers and tested experimentally.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenosine Triphosphate / metabolism
  • Biophysics / methods*
  • Cell Division
  • Cell Enlargement
  • Cell Proliferation
  • Computer Simulation
  • Gene Expression Regulation, Neoplastic*
  • Humans
  • Kinetics
  • Mitochondria / metabolism
  • Mitosis
  • Models, Biological
  • Neoplasms / pathology*
  • Oxygen / metabolism
  • Oxygen Consumption

Substances

  • Adenosine Triphosphate
  • Oxygen