Chemical detection of Z-DNA within the maize Adh1 promoter

Plant Mol Biol. 1992 Apr;18(6):1181-4. doi: 10.1007/BF00047722.

Abstract

Z-DNA is a left-handed helix which can form within tracts of alternating purines and pyrimidines. Tracts of potential Z-DNA identified by sequence inspection are often noted within regulatory portions of genes, but evidence that these tracts of sequence actually exist as Z-DNA is very limited, and not available for any plant gene. In this study, the chemical probes osmium tetroxide, diethylpyrocarbonate and hydroxylamine were used to show that a tract of alternating purines and pyrimidines in the Adh1 promoter (from -311 to -325) actually assumes a Z-DNA conformation under superhelical stress in vitro.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Alcohol Dehydrogenase / genetics*
  • Base Sequence
  • DNA, Superhelical / chemistry*
  • DNA, Superhelical / genetics
  • Diethyl Pyrocarbonate / chemistry
  • Hydroxylamine
  • Hydroxylamines / chemistry
  • Molecular Sequence Data
  • Nucleic Acid Conformation*
  • Osmium Tetroxide / chemistry
  • Promoter Regions, Genetic / genetics*
  • Zea mays / enzymology
  • Zea mays / genetics*

Substances

  • DNA, Superhelical
  • Hydroxylamines
  • Hydroxylamine
  • Alcohol Dehydrogenase
  • Diethyl Pyrocarbonate
  • Osmium Tetroxide