[Identification of PCR markers associated with cytoplasmic male sterility in Brassica oleracea var Botrytis]

Yi Chuan. 2005 Mar;27(2):236-40.
[Article in Chinese]

Abstract

The homology-based candidate gene method was used to identified the specific PCR markers linked to cytoplasmic male sterility (CMS) in cauliflower( Brassica oleracea var botrytis.). Searching the DNA and protein data-base of NCBI , correlative genes or open reading frames were identified . Analysis of biosoft, based on the conservative regions ,five primers were designed . Among them, only primer P9/P10 produced a 313- bp specific fragment. Identified by individual plant testing , analysis of RT-PCR and dot blot ,this fragment was only existed in CMS cauliflower knxd612. Analysis of the sequence indicated it was high homologous(98%) with orf138 of Ogura CMS radish. Primary result suggested that the cytoplasmic type of CMS cauliflower knxd612 may belong to Ogura type. This research offered a good foundation to further investigate the CMS mechanism of cauliflower in molecular level.

Publication types

  • English Abstract

MeSH terms

  • Amino Acid Sequence
  • Base Sequence
  • Blotting, Northern
  • Brassica / genetics*
  • Brassica / physiology
  • Cytoplasm / metabolism
  • DNA, Plant / chemistry
  • DNA, Plant / genetics
  • Gene Expression Regulation, Plant
  • Genetic Markers / genetics*
  • Molecular Sequence Data
  • Open Reading Frames
  • Plant Infertility / genetics*
  • Plant Infertility / physiology
  • Polymerase Chain Reaction
  • Reproduction / genetics
  • Reproduction / physiology
  • Reverse Transcriptase Polymerase Chain Reaction
  • Sequence Analysis, DNA

Substances

  • DNA, Plant
  • Genetic Markers

Associated data

  • GENBANK/AY515496