Genetic and antigenic characterization of an atypical pestivirus isolate, a putative member of a novel pestivirus species

J Gen Virol. 2004 Dec;85(Pt 12):3647-3652. doi: 10.1099/vir.0.80238-0.

Abstract

The genus Pestivirus within the family Flaviviridae currently consists of four different main species: Classical swine fever virus, Bovine viral diarrhea virus types 1 and 2 and Border disease virus. A fifth tentative species is represented by an isolate from a giraffe. In this study, a completely new pestivirus, isolated from a batch of fetal calf serum that was collected in Brazil, is described. It is proposed that the isolate D32/00_'HoBi' may constitute a novel sixth pestivirus species, because it is genetically, as well as antigenically, markedly different from all other pestiviruses. Based on the entire N(pro)- and E2-encoding sequences, identities of <70 % to all other pestivirus species were determined. Similarly, cross-neutralization and binding studies using antisera and mAbs revealed marked antigenic differences between D32/00_'HoBi' and all other pestiviruses.

MeSH terms

  • 3' Untranslated Regions / chemistry
  • 5' Untranslated Regions / chemistry
  • Animals
  • Base Sequence
  • Cattle
  • Fetal Blood / virology
  • Molecular Sequence Data
  • Pestivirus / classification*
  • Pestivirus / genetics
  • Pestivirus / immunology
  • Phylogeny

Substances

  • 3' Untranslated Regions
  • 5' Untranslated Regions

Associated data

  • GENBANK/AY489116
  • GENBANK/AY489117
  • GENBANK/AY604725
  • GENBANK/AY604726
  • GENBANK/AY713481