Hongiella marincola sp. nov., isolated from sea water of the East Sea in Korea

Int J Syst Evol Microbiol. 2004 Sep;54(Pt 5):1845-1848. doi: 10.1099/ijs.0.63170-0.

Abstract

Two Gram-negative, non-motile, non-spore-forming, rod-shaped strains, SW-2T and SW-26, were isolated from sea water of the East Sea in Korea. These organisms grew optimally at 37 degrees C and in the presence of 2-3 % (w/v) NaCl. They did not grow without NaCl or in the presence of >9 % (w/v) NaCl. Strains SW-2T and SW-26 were characterized chemotaxonomically as having MK-7 as the predominant isoprenoid quinone and iso-C(15 : 0) as the major fatty acid. The DNA G + C content of strains SW-2T and SW-26 was 43 mol%. A neighbour-joining tree based on 16S rRNA gene sequences showed that strains SW-2T and SW-26 fell within the Cytophaga-Flavobacterium-Bacteroides group and formed a coherent cluster with Hongiella species. Strains SW-2T and SW-26 showed a 16S rRNA gene sequence similarity value of 99.9 % and a mean DNA-DNA relatedness level of 87 % to each other. Levels of 16S rRNA gene sequence similarity between strains SW-2T and SW-26 and the type strains of two Hongiella species ranged from 94.2 to 96.6 %. On the basis of phenotypic and chemotaxonomic properties and phylogenetic distinctiveness, strains SW-2T and SW-26 should be placed in the genus Hongiella as members of a novel species, for which the name Hongiella marincola sp. nov. is proposed. The type strain is SW-2T (= KCTC 12180T = DSM 16067T).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Typing Techniques
  • Base Composition
  • Cytophagaceae / classification*
  • Cytophagaceae / cytology
  • Cytophagaceae / isolation & purification*
  • Cytophagaceae / physiology
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / isolation & purification
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / isolation & purification
  • Fatty Acids / analysis
  • Genes, rRNA
  • Growth Inhibitors / pharmacology
  • Korea
  • Molecular Sequence Data
  • Movement
  • Nucleic Acid Hybridization
  • Phylogeny
  • Quinones / analysis
  • RNA, Bacterial / genetics
  • RNA, Ribosomal, 16S / genetics
  • Saline Solution, Hypertonic / pharmacology
  • Seawater / microbiology*
  • Sequence Analysis, DNA
  • Spores, Bacterial
  • Temperature
  • Water Microbiology

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • Fatty Acids
  • Growth Inhibitors
  • Quinones
  • RNA, Bacterial
  • RNA, Ribosomal, 16S
  • Saline Solution, Hypertonic

Associated data

  • GENBANK/AY533663
  • GENBANK/AY533664
  • GENBANK/AY533665