Dynamics of biological molecules irradiated by short x-ray pulses

Phys Rev E Stat Nonlin Soft Matter Phys. 2004 May;69(5 Pt 1):051906. doi: 10.1103/PhysRevE.69.051906. Epub 2004 May 18.

Abstract

Very short and intense x-ray pulses can be used for diffraction imaging of single biological molecules. Inevitably, x-ray absorption initiates damage that degrades the molecule's image. This paper presents a continuum model of the physics that leads to damage when a small particle absorbs a large x-ray dose. The main processes are found to be ionization and Coulomb-force driven atomic motion. Trapping of electrons, Debye shielding, and nonuniform collisional ionization all have a significant effect on the overall damage kinetics.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Biophysics / methods*
  • Computer Simulation
  • Electrons
  • Kinetics
  • Models, Statistical
  • Time Factors
  • X-Ray Diffraction
  • X-Rays*