Translation repression by GLD-1 protects its mRNA targets from nonsense-mediated mRNA decay in C. elegans

Genes Dev. 2004 May 1;18(9):1047-59. doi: 10.1101/gad.1188404. Epub 2004 Apr 22.

Abstract

Previously, we identified multiple in vivo mRNA targets of the maxi-KH/STAR domain protein GLD-1 by their ability to interact with GLD-1 in cytoplasmic extracts and, for all targets tested thus far, GLD-1 functions as a translational repressor. However, here we show that GLD-1 stabilizes the mRNAs of two targets, gna-2 (T23G11.2) and Y75B12B.1. gna-2 mRNA has two upstream open reading frames (uORF), resulting in two premature stop codons. We found that gna-2 mRNA is a naturally occurring mRNA target of nonsense-mediated mRNA decay (NMD) and that the binding of GLD-1 protects gna-2 mRNA from NMD, likely by repressing translation of the uORFs. Therefore, gna-2 mRNA comes under two posttranscriptional controls: (1) translation regulation by a specific translational repressor, GLD-1; and (2) uORF elicited regulation, mainly through NMD. As a result, these two posttranscriptional controls together provide precise temporal and spatial control of gene expression. Consistent with this novel mode of regulation, when GLD-1 mRNA targets acquire premature stop codon mutations, GLD-1 protects them from NMD. Analysis of several mRNA targets containing premature stop codons suggests that in translation repression, GLD-1 either represses ribosome assembly on the target mRNA, or subsequent ribosome elongation to the premature stop codon.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • 3' Untranslated Regions
  • 5' Untranslated Regions
  • Animals
  • Base Sequence
  • Caenorhabditis elegans / genetics*
  • Caenorhabditis elegans / metabolism*
  • Caenorhabditis elegans Proteins / genetics*
  • Codon, Nonsense
  • DNA, Helminth / genetics
  • Genes, Helminth
  • Models, Biological
  • Open Reading Frames
  • Protein Biosynthesis
  • RNA Stability
  • RNA, Helminth / genetics*
  • RNA, Helminth / metabolism*
  • RNA, Messenger / genetics*
  • RNA, Messenger / metabolism*
  • Repressor Proteins / genetics

Substances

  • 3' Untranslated Regions
  • 5' Untranslated Regions
  • Caenorhabditis elegans Proteins
  • Codon, Nonsense
  • DNA, Helminth
  • GLD-1 protein, C elegans
  • RNA, Helminth
  • RNA, Messenger
  • Repressor Proteins