The constitutional t(17;22): another translocation mediated by palindromic AT-rich repeats

Am J Hum Genet. 2003 Mar;72(3):733-8. doi: 10.1086/368062. Epub 2003 Jan 29.

Abstract

We have demonstrated that the breakpoints of the constitutional t(11;22) are located at palindromic AT-rich repeats (PATRRs) on 11q23 and 22q11. As a mechanism for this recurrent translocation, we proposed that the PATRR forms a cruciform structure that induces the genomic instability leading to the rearrangement. A patient with neurofibromatosis type 1 (NF1) had previously been found to have a constitutional t(17;22) disrupting the NF1 gene on 17q11. We have localized the breakpoint on 22q11 within the 22q11-specific low-copy repeat where the breakpoints of the constitutional t(11;22)s reside, implying a similar palindrome-mediated mechanism for generation of the t(17;22). The NF1 gene contains a 195-bp PATRR within intron 31. We have isolated the junction fragments from both the der(17) and the der(22). The breakpoint on 17q11 is close to the center of the PATRR. A published breakpoint of an additional NF1-afflicted patient with a constitutional t(17;22) is also located close to the center of the same PATRR. Our data lend additional support to the hypothesis that PATRR-mediated genomic instability can lead to a variety of translocations.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Base Sequence
  • Centromere / genetics
  • Chromosome Mapping
  • Chromosomes, Human, Pair 11
  • Chromosomes, Human, Pair 17*
  • Chromosomes, Human, Pair 22*
  • Dinucleotide Repeats / genetics*
  • Exons
  • Humans
  • In Situ Hybridization, Fluorescence
  • Introns
  • Molecular Sequence Data
  • Neurofibromin 1 / genetics
  • Telomere / genetics

Substances

  • Neurofibromin 1

Associated data

  • GENBANK/AC004526
  • OMIM/162200