X chromosome dosage by quantitative fluorescent PCR and rapid prenatal diagnosis of sex chromosome aneuploidies

Mol Hum Reprod. 2002 Nov;8(11):1042-5. doi: 10.1093/molehr/8.11.1042.

Abstract

During the past few years, rapid prenatal diagnosis of chromosome aneuploidies has been successfully achieved by quantitative fluorescent PCR (QF-PCR) amplification of chromosome-specific small tandem repeats (STR). This approach has proven to be very useful in clinical settings, since it allows the detection of major numerical disorders in a few hours after sampling. For the detection of Turner's syndrome (45,X), several highly polymorphic STR on the X chromosome are needed in order to reduce the likelihood that a normal female might be homozygous for all sequences and, consequently, that the test could fail to discriminate between samples retrieved from a Turner's and a normal female fetus. Here we report a new method for rapid and accurate detection of X chromosome copy number in prenatal samples that does not depend on STR heterozygosity. The test is based on QF-PCR amplification of the X-linked HPRT together with the autosomal D21S1411 used as internal control for quantification. In the course of this study, this assay allowed the prenatal diagnosis of a rare case of a normal female homozygous for four selected highly polymorphic X chromosome STR, as well as the assessment of the normal chromosome complement of a fetus homozygous for five chromosome 21 markers.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amniocentesis
  • Aneuploidy*
  • Chromosomes, Human, X*
  • Dosage Compensation, Genetic
  • Female
  • Fetal Diseases / diagnosis*
  • Fetal Diseases / genetics
  • Fluorescence
  • Genetic Markers
  • Heterozygote
  • Humans
  • Hypoxanthine Phosphoribosyltransferase / genetics
  • Male
  • Pregnancy
  • Prenatal Diagnosis / methods*
  • Reverse Transcriptase Polymerase Chain Reaction / methods*
  • Sex Chromosome Aberrations
  • Sex Chromosome Disorders / diagnosis*
  • Sex Chromosome Disorders / genetics
  • Tandem Repeat Sequences
  • Turner Syndrome / genetics

Substances

  • Genetic Markers
  • Hypoxanthine Phosphoribosyltransferase