Specific methylation of the CpG-rich domains in the promoter of the human tissue transglutaminase gene

Gene. 2002 Sep 4;297(1-2):103-12. doi: 10.1016/s0378-1119(02)00874-0.

Abstract

The activity of tissue transglutaminase is present in many cells and tissues but almost absent in leucocytes and lymphocytes. The present work describes the distribution of 5-methylcytosine along the bisulphite-converted promoter of the human tissue transglutaminase gene as being in an essentially repressed state. In this promoter, the chain-specific sequencing revealed the location of three CpG-rich domains whose methylation responds to an 'all or nothing' signal. While the CpGs of domain 1, at the 5'-end, and 2, in the mid-promoter, were fully methylated, those of domain 3, at the 3'-end, were fully unmethylated. Before the 5'-UTR sequence, from site+1 to site+67, also unmethylated, there was thus a striking contrast in the post-synthetic modification between the sequence, from -1594 to -436, containing domains 1 and 2, and the sequence, from -435 to -1, containing domain 3 with the core promoter.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • 5-Methylcytosine
  • Base Sequence
  • Binding Sites / genetics
  • CpG Islands / genetics*
  • Cytosine / analogs & derivatives*
  • Cytosine / metabolism
  • DNA / chemistry
  • DNA / genetics
  • DNA / metabolism
  • DNA Methylation*
  • Gene Expression Regulation, Enzymologic
  • Humans
  • Molecular Sequence Data
  • Polymerase Chain Reaction
  • Promoter Regions, Genetic / genetics*
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism
  • Reverse Transcriptase Polymerase Chain Reaction
  • Sequence Analysis, DNA
  • Transglutaminases / genetics*

Substances

  • RNA, Messenger
  • 5-Methylcytosine
  • Cytosine
  • DNA
  • Transglutaminases