Acridine conjugates of 3-clip-phen: influence of the linker on the synthesis and the DNA cleavage activity of their copper complexes

Bioconjug Chem. 2002 Sep-Oct;13(5):1013-20. doi: 10.1021/bc020013x.

Abstract

To increase the DNA cleavage activity and the cell delivery of the bis(phenanthroline) DNA cleaver "3-Clip-Phen", conjugates between 3-Clip-Phen and the intercalators acridine and 6-chloro-2-methoxyacridine, through amino acid linkers of various length, were prepared. After complexation with CuCl(2), the ability of these conjugates to cleave phiX 174 DNA in the presence of a reductant and air was compared. The results indicated that (i) the coupling of 3-Clip-Phen to an acridine derivative increased the DNA cleavage efficiency of the copper complexes, (ii) the acridine derivatives were more active than 6-chloro-2-methoxyacridine derivatives, (iii) the linker length influenced cleavage efficiency, the highest DNA cleavage activity being obtained for an aminocaproic spacer.

Publication types

  • Comparative Study

MeSH terms

  • Acridines / chemistry*
  • Bacteriophages / drug effects*
  • Bacteriophages / metabolism
  • Copper / chemistry*
  • Copper / pharmacology
  • Cross-Linking Reagents / chemistry*
  • Drug Delivery Systems*
  • Hydrolysis / drug effects
  • Intercalating Agents / chemistry
  • Phenanthrolines / chemistry*
  • Phenanthrolines / pharmacokinetics*
  • Phenanthrolines / pharmacology
  • Structure-Activity Relationship

Substances

  • Acridines
  • Clip-phen
  • Cross-Linking Reagents
  • Intercalating Agents
  • Phenanthrolines
  • Copper