The skeletal muscle Ca2+ release channel has an oxidoreductase-like domain

Proc Natl Acad Sci U S A. 2002 Sep 17;99(19):12155-60. doi: 10.1073/pnas.182058899. Epub 2002 Sep 6.

Abstract

We used a combination of bioinformatics, electron cryomicroscopy, and biochemical techniques to identify an oxidoreductase-like domain in the skeletal muscle Ca2+ release channel protein (RyR1). The initial prediction was derived from sequence-based fold recognition for the N-terminal region (41-420) of RyR1. The putative domain was computationally localized to the clamp domain in the cytoplasmic region of a 22A structure of RyR1. This localization was subsequently confirmed by difference imaging with a sequence specific antibody. Consistent with the prediction of an oxidoreductase domain, RyR1 binds [3H]NAD+, supporting a model in which RyR1 has a oxidoreductase-like domain that could function as a type of redox sensor.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Biophysical Phenomena
  • Biophysics
  • Computer Simulation
  • Cryoelectron Microscopy
  • In Vitro Techniques
  • Models, Molecular
  • Molecular Sequence Data
  • Muscle, Skeletal / metabolism
  • NAD / metabolism
  • Oxidation-Reduction
  • Oxidoreductases / chemistry*
  • Oxidoreductases / genetics
  • Oxidoreductases / metabolism
  • Protein Structure, Tertiary
  • Rabbits
  • Ryanodine Receptor Calcium Release Channel / chemistry*
  • Ryanodine Receptor Calcium Release Channel / genetics
  • Ryanodine Receptor Calcium Release Channel / metabolism
  • Sequence Homology, Amino Acid

Substances

  • Ryanodine Receptor Calcium Release Channel
  • NAD
  • Oxidoreductases