A modified neutral comet assay: elimination of lysis at high temperature and validation of the assay with anti-single-stranded DNA antibody

Mutat Res. 2002 Jun 27;518(1):9-20. doi: 10.1016/s1383-5718(02)00070-0.

Abstract

Comet assay under neutral conditions allows the detection of DNA double-strand breaks (DSB), considered to be the biologically relevant radiation-induced lesion. In this report, we describe modifications of the neutral comet method, which simplify and facilitate its use for estimation of DNA DSB in X-irradiated mammalian cells in culture. The analysis carried out according to this protocol takes less time than those most often applied. Also, the use of lysis at 50 degrees C is avoided; this is important in view of the presence of heat-labile sites in the chromatin of irradiated cells, recently reported by Rydberg [Radiation-induced heat-labile sites that convert into DNA double-strand breaks, Radiation Research 153 (2000) 805-812]. The comets have well-defined, sharp limits, suitable for image analysis. The chromatin of the hydrogen peroxide-treated or UV-C-irradiated cell remains condensed similarly to that of the control cells. We checked the neutral comets for the presence of single-stranded DNA by means of a specific antibody. The results point to a satisfactory sensitivity of the modified neutral comet assay and its specificity for DSB. The minimum detection level of the modified neutral comet assay is about 5 Gy.

Publication types

  • Research Support, Non-U.S. Gov't
  • Validation Study

MeSH terms

  • Animals
  • Antibodies, Antinuclear
  • CHO Cells
  • Comet Assay / methods*
  • Cricetinae
  • DNA / analysis
  • DNA / radiation effects
  • DNA Damage*
  • DNA Repair
  • DNA, Single-Stranded / immunology
  • Hot Temperature
  • Hydrogen Peroxide / toxicity
  • Hydrogen-Ion Concentration
  • Ultraviolet Rays / adverse effects

Substances

  • Antibodies, Antinuclear
  • DNA, Single-Stranded
  • DNA
  • Hydrogen Peroxide