Analysis of carbon metabolism in Escherichia coli strains with an inactive phosphotransferase system by (13)C labeling and NMR spectroscopy

Metab Eng. 2002 Apr;4(2):124-37. doi: 10.1006/mben.2001.0209.

Abstract

We have developed Escherichia coli strains that internalize glucose utilizing the GalP permease instead of the phosphoenolpyruvate:carbohydrate phosphotransferase system. It has been demonstrated that a strain with these modifications (PTS(-)Glc(+)) can direct more carbon flux into the aromatic pathway than the wild-type parental strain (N. Flores et al., 1996, Nat. Biotechnol. 14, 620-623; G. Gosset et al., 1996, J. Ind. Microbiol. 17, 47-52; J. L. Baéz et al., 2001, Biotechnol. Bioeng. 73, 530-535). In this study, we have determined and compared the carbon fluxes of a wild-type strain (JM101), a PTS(-)Glc(-) strain, and two isogenic PTS(-)Glc(+) derivatives named PB12 and PB13 by combining genetic, biochemical, and NMR approaches. It was determined that in these strains a functional glk gene in the chromosome is required for rapid glucose consumption; furthermore, glucokinase-specific activities were higher than in the wild-type strain. (13)C labeling and NMR analysis allowed the determination of differences in vivo which include higher glycolytic fluxes of 93.1 and 89.2% compared with the 76.6% obtained for the wild-type E. coli. In PB12 and PB13 we found a flux through the malic enzymes of 4 and 10%, respectively, compared to zero in the wild-type strain. While flux through the Pck enzyme was absent in PB12 and PB13, in the wild type it was 7.7%. Finally, it was found that in the JM101 and PB12 strains both the oxidative and the nonoxidative branches of the pentose phosphate pathway contributed to ribose 5-phosphate synthesis, whereas in PB13 this pentose was synthesized almost exclusively through the oxidative branch. The determined carbon fluxes correlate with biochemical and genetic characterizations.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Biomedical Engineering
  • Carbon / metabolism*
  • Carbon Isotopes
  • Escherichia coli / genetics
  • Escherichia coli / metabolism*
  • Glucokinase / metabolism
  • Glucose / metabolism
  • Magnetic Resonance Spectroscopy
  • Membrane Transport Proteins / metabolism
  • Monosaccharide Transport Proteins
  • Mutation
  • Pentose Phosphate Pathway
  • Phosphoenolpyruvate Sugar Phosphotransferase System / metabolism

Substances

  • Carbon Isotopes
  • Membrane Transport Proteins
  • Monosaccharide Transport Proteins
  • galactose permease
  • Carbon
  • Phosphoenolpyruvate Sugar Phosphotransferase System
  • Glucokinase
  • Glucose