Functional characterization of the 5' flanking region of human ubiquitin fusion degradation 1 like gene (UFD1L)

Cell Biochem Funct. 2002 Jun;20(2):163-70. doi: 10.1002/cbf.966.

Abstract

UFD1L (Ubiquitin Fusion Degradation 1 Like) gene encodes for a component of a multi-complex involved in the degradation of ubiquitin fusion proteins. The gene maps on chromosome 22q11, in a region commonly deleted in severe congenital disorders such as DiGeorge (DGS) and velo-cardio-facial (VCFS) syndromes. UFD1L is a single copy gene ubiquitously expressed in high levels in the pharyngeal pouches and fourth branchial arch artery during development. To understand the regulation of UFD1L expression we performed a functional analysis of its 5' regulatory region. 5'-RACE and primer extension analyses revealed the presence of different transcription start sites in adult and fetal tissues. UFD1L 5' flanking region contains a TATA-box motif and is also very GC-rich with a CpG island encompassing exon 1. Transcriptional activity of this region was examined by transfection experiments of promoter-GFP reporter gene constructs in a human epithelial cell line. These experiments revealed the importance of the region between -17 and -463 nt which contains the TATA-box. EMSA assay resulted in the detection of five functional consensus sequences respectively for the transcription complex TFIID and for the transcription factors AP-1 (one site), AP-2 (one) and Sp1 (two).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • 5' Flanking Region / physiology*
  • Adaptor Proteins, Vesicular Transport
  • Animals
  • Base Sequence
  • Binding Sites
  • DNA
  • DNA-Binding Proteins / metabolism
  • Gene Expression Regulation
  • Humans
  • Intracellular Signaling Peptides and Proteins
  • Molecular Sequence Data
  • Promoter Regions, Genetic
  • Proteins / genetics*
  • Sp1 Transcription Factor / metabolism
  • Transcription Factor AP-1 / metabolism
  • Transcription Factor AP-2
  • Transcription Factor TFIID
  • Transcription Factors / metabolism
  • Transcription Factors, TFII / metabolism

Substances

  • Adaptor Proteins, Vesicular Transport
  • DNA-Binding Proteins
  • Intracellular Signaling Peptides and Proteins
  • Proteins
  • Sp1 Transcription Factor
  • Transcription Factor AP-1
  • Transcription Factor AP-2
  • Transcription Factor TFIID
  • Transcription Factors
  • Transcription Factors, TFII
  • UFD1 protein, human
  • DNA