Barrier to rotation and conformation of the -NR2 group in cytosine and its derivatives. Part II. Experimental and theoretical dipole moments of methylated cytosines

Biochim Biophys Acta. 1975 Nov 4;407(4):420-9. doi: 10.1016/0005-2787(75)90294-4.

Abstract

The dipole moments of several cytosine, methylaminocytosine and dime-thylaminocytosine derivatives with and without an ortho methyl group were determined experimentally in dioxane and benzene. Calculations of total energies and dipole moments were performed by the CNDO/2 and INDO methods for sp2 and sp3 hybridization of exocyclic nitrogen for different values of rotational angle phiC-N. Comparison of the experimental dipole moments with those calculated for the energy minima suggests that the conformation of the dimethylamino group is not planar and differs from that found in cytosine. 1,5,7-Trimethylcytosine, with the dipole moment of 7 Deby units, was considered to be the model compound which closely reproduces the dipole moment of cytosine.

MeSH terms

  • Amines
  • Calorimetry
  • Cytosine / analogs & derivatives*
  • Evaluation Studies as Topic
  • Hydrogen Bonding
  • Magnetic Resonance Spectroscopy
  • Models, Molecular
  • Molecular Conformation
  • Spectrophotometry, Infrared
  • Structure-Activity Relationship
  • Thermodynamics

Substances

  • Amines
  • Cytosine