S/MARt DB: a database on scaffold/matrix attached regions

Nucleic Acids Res. 2002 Jan 1;30(1):372-4. doi: 10.1093/nar/30.1.372.

Abstract

S/MARt DB, the S/MAR transaction database, is a relational database covering scaffold/matrix attached regions (S/MARs) and nuclear matrix proteins that are involved in the chromosomal attachment to the nuclear scaffold. The data are mainly extracted from original publications, but a World Wide Web interface for direct submissions is also available. S/MARt DB is closely linked to the TRANSFAC database on transcription factors and their binding sites. It is freely accessible through the World Wide Web (http://transfac.gbf.de/SMARtDB/) for non-profit research.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Binding Sites
  • Chromatin / chemistry
  • Chromosomes / chemistry
  • DNA-Binding Proteins / chemistry
  • DNA-Binding Proteins / physiology
  • Database Management Systems
  • Databases, Nucleic Acid*
  • Databases, Protein*
  • Forecasting
  • Information Storage and Retrieval
  • Internet
  • Macromolecular Substances
  • Nuclear Matrix / chemistry*
  • Nuclear Proteins / chemistry*
  • Nuclear Proteins / physiology
  • Systems Integration
  • Transcription Factors / metabolism
  • User-Computer Interface

Substances

  • Chromatin
  • DNA-Binding Proteins
  • Macromolecular Substances
  • Nuclear Proteins
  • Transcription Factors