New insights into the activation of o-xylene biodegradation in Pseudomonas stutzeri OX1 by pathway substrates

EMBO Rep. 2001 May;2(5):409-14. doi: 10.1093/embo-reports/kve092.

Abstract

The regulation of the tou operon of Pseudomonas stutzeri OX1, for degradation of toluene and o-xylene via phenolic intermediates, has been faithfully reconstructed in vitro with purified proteins. The set-up included the prokaryotic enhancer-binding protein TouR, the sigma54-dependent PToMO promoter and the sigma54-containing RNA polymerase. With this system we prove that direct binding of 2-methylphenol (o-cresol) to TouR is the only regulatory step for activation of PToMO in response to aromatic effectors, thereby ruling out the involvement of other factors or a need for protein processing. In addition, we found that while TouR failed entirely to activate PToMO in the absence of inducers, the protein had per se a very significant ATPase activity, which was only moderately increased by o-cresol addition. The results presented here support the view that TouR-like proteins are particularly suitable as evolutionary assets to endow recently evolved pathways for the degradation of environmental pollutants with an optimal degree of transcriptional regulation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenosine Triphosphatases / genetics
  • Adenosine Triphosphatases / metabolism
  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism*
  • Biodegradation, Environmental
  • Cresols / chemistry
  • Cresols / metabolism*
  • Cresols / pharmacology
  • DNA-Binding Proteins*
  • DNA-Directed RNA Polymerases / metabolism
  • Gene Expression Regulation, Bacterial* / drug effects
  • Genes, Bacterial
  • Genes, Regulator
  • Genes, Reporter
  • Promoter Regions, Genetic
  • Pseudomonas / genetics*
  • Pseudomonas / metabolism*
  • RNA Polymerase Sigma 54
  • Recombinant Fusion Proteins / metabolism
  • Sigma Factor / metabolism
  • Transcription, Genetic
  • Xenobiotics / metabolism
  • Xylenes / metabolism

Substances

  • Bacterial Proteins
  • Cresols
  • DNA-Binding Proteins
  • Recombinant Fusion Proteins
  • Sigma Factor
  • Xenobiotics
  • Xylenes
  • DNA-Directed RNA Polymerases
  • RNA Polymerase Sigma 54
  • Adenosine Triphosphatases
  • cresol
  • 2-xylene