Amino acid residues involved in substrate binding and catalysis in an insect digestive beta-glycosidase

Biochim Biophys Acta. 2001 Feb 9;1545(1-2):41-52. doi: 10.1016/s0167-4838(00)00260-0.

Abstract

A beta-glycosidase (M(r) 50000) from Spodoptera frugiperda larval midgut was purified, cloned and sequenced. It is active on aryl and alkyl beta-glucosides and cellodextrins that are all hydrolyzed at the same active site, as inferred from experiments of competition between substrates. Enzyme activity is dependent on two ionizable groups (pK(a1)=4.9 and pK(a2)=7.5). Effect of pH on carbodiimide inactivation indicates that the pK(a) 7.5 group is a carboxyl. k(cat) and K(m) values were obtained for different p-nitrophenyl beta-glycosides and K(i) values were determined for a range of alkyl beta-glucosides and cellodextrins, revealing that the aglycone site has three subsites. Binding data, sequence alignments and literature beta-glycosidase 3D data supported the following conclusions: (1) the groups involved in catalysis were E(187) (proton donor) and E(399) (nucleophile); (2) the glycone moiety is stabilized in the transition state by a hydrophobic region around the C-6 hydroxyl and by hydrogen bonds with the other equatorial hydroxyls; (3) the aglycone site is a cleft made up of hydrophobic amino acids with a polar amino acid only at its first (+1) subsite.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Binding Sites
  • Binding, Competitive
  • Catalysis
  • Cellulose / analogs & derivatives*
  • Cellulose / metabolism
  • Cloning, Molecular
  • DNA, Complementary / genetics
  • Dextrins / metabolism
  • Genes, Insect
  • Glycosides / metabolism
  • Hydrolysis
  • Insect Proteins / chemistry*
  • Insect Proteins / genetics
  • Insect Proteins / isolation & purification
  • Insect Proteins / metabolism
  • Intestines / enzymology*
  • Kinetics
  • Molecular Sequence Data
  • Sequence Alignment
  • Sequence Homology, Amino Acid
  • Spodoptera / enzymology*
  • Spodoptera / genetics
  • Spodoptera / growth & development
  • Structure-Activity Relationship
  • Substrate Specificity
  • beta-Glucosidase / chemistry*
  • beta-Glucosidase / genetics
  • beta-Glucosidase / isolation & purification
  • beta-Glucosidase / metabolism

Substances

  • DNA, Complementary
  • Dextrins
  • Glycosides
  • Insect Proteins
  • Cellulose
  • cellodextrin
  • beta-Glucosidase

Associated data

  • GENBANK/AF052729