Analysis of core promoter sequences located downstream from the TATA element in the hsp70 promoter from Drosophila melanogaster

Mol Cell Biol. 2001 Mar;21(5):1593-602. doi: 10.1128/MCB.21.5.1593-1602.2001.

Abstract

TFIID recognizes multiple sequence elements in the hsp70 promoter of Drosophila. Here, we investigate the function of sequences downstream from the TATA element. A mutation in the initiator was identified that caused an eightfold reduction in binding of TFIID and a fourfold reduction in transcription in vitro. Another mutation in the +24 to +29 region was somewhat less inhibitory, but a mutation in the +14 to +19 region had essentially no effect. The normal promoter and the mutants in the initiator and the +24 to +29 region were transformed into flies by P element-mediated transformation. The initiator mutation reduced expression an average of twofold in adult flies, whereas the mutation in the +24 to +29 region had essentially no effect. In contrast, a promoter combining the two mutations was expressed an average of sixfold less than the wild type. The results suggest that the initiator and the +24 to +29 region could serve overlapping functions in vivo. Protein-DNA cross-linking was used to identify which subunits of TFIID contact the +24 to +29 region and the initiator. No specific subunits were found to cross-link to the +24 to +29 region. In contrast, the initiator cross-linked exclusively to dTAF230. Remarkably, dTAF230 cross-links approximately 10 times more efficiently to the nontranscribed strand than to the transcribed strand at the initiator.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Animals
  • Base Sequence
  • DNA / metabolism
  • DNA Footprinting
  • Deoxyribonuclease I / metabolism
  • Drosophila melanogaster / genetics*
  • HSP70 Heat-Shock Proteins / genetics*
  • Models, Genetic
  • Molecular Sequence Data
  • Mutation
  • Plasmids / metabolism
  • Precipitin Tests
  • Promoter Regions, Genetic*
  • Protein Binding
  • Sequence Homology, Nucleic Acid
  • TATA Box
  • Transcription Factor TFIID
  • Transcription Factors, TFII / metabolism
  • Transcription, Genetic
  • Transformation, Genetic
  • Ultraviolet Rays
  • beta-Galactosidase / metabolism

Substances

  • HSP70 Heat-Shock Proteins
  • Transcription Factor TFIID
  • Transcription Factors, TFII
  • DNA
  • Deoxyribonuclease I
  • beta-Galactosidase