Application of BARE-1 retrotransposon markers to the mapping of a major resistance gene for net blotch in barley

Mol Gen Genet. 2000 Oct;264(3):325-34. doi: 10.1007/s004380000326.

Abstract

Net blotch, which is caused by the fungus Pyrenophoral teres Drechs. f. teres Smedeg., presents a serious problem for barley production worldwide, and the identification and deployment of sources of resistance to it are key objectives for many breeders. Here, we report the identification of a major resistance gene, accounting for 65% of the response variation, in a cross between the resistant line C19819 and the susceptible cv. Rolfi. The resistance gene was mapped to chromosome 6H with the aid of two recently developed systems of retrotransposon-based molecular markers, REMAP and IRAP. A total of 239 BARE-1 and Sukkula retrotransposon markers were mapped in the cross, and the 30-cM segment containing the locus with significant resistance effect contained 26 of the markers. The type and local density of the markers should facilitate future map-based cloning of the resistance gene as well as manipulation of the resistance through backcross breeding.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alleles
  • Chromosome Mapping
  • Crosses, Genetic
  • Genes, Plant / genetics*
  • Genetic Linkage
  • Genetic Markers
  • Hordeum / genetics*
  • Immunity, Innate / genetics*
  • Microsatellite Repeats / genetics
  • Models, Genetic
  • Plant Proteins / genetics*
  • Polymerase Chain Reaction
  • Polymorphism, Genetic
  • Polymorphism, Restriction Fragment Length
  • Quantitative Trait, Heritable
  • Retroelements*

Substances

  • BARE-1 protein, Hordeum vulgare
  • Genetic Markers
  • Plant Proteins
  • Retroelements