Use of combined microautoradiography and fluorescence in situ hybridization to determine carbon metabolism in mixed natural communities of uncultured bacteria from the genus Achromatium

Appl Environ Microbiol. 2000 Oct;66(10):4518-22. doi: 10.1128/AEM.66.10.4518-4522.2000.

Abstract

Combined microautoradiography and fluorescence in situ hybridization (FISH) was used to investigate carbon metabolism in uncultured bacteria from the genus Achromatium. All of the Achromatium species identified in a freshwater sediment from Rydal Water, Cumbria, United Kingdom, which were distinguishable only by FISH, assimilated both [(14)C]bicarbonate and [(14)C]acetate. This extends previous findings that Achromatium spp. present at another location could only utilize organic carbon sources. Achromatium spp., therefore, probably exhibit a range of physiologies, i.e., facultative chemolithoautotrophy, mixotrophy, and chemoorganoheterotrophy, similar to other large sulfur bacteria (e.g., Beggiatoa spp.).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acetates / metabolism*
  • Autoradiography / methods
  • Bicarbonates / metabolism*
  • Carbon / metabolism*
  • Carbon Radioisotopes
  • Fresh Water / microbiology*
  • Geologic Sediments / microbiology*
  • Gram-Negative Aerobic Bacteria / classification*
  • Gram-Negative Aerobic Bacteria / isolation & purification
  • Gram-Negative Aerobic Bacteria / metabolism*
  • In Situ Hybridization, Fluorescence
  • Phylogeny*

Substances

  • Acetates
  • Bicarbonates
  • Carbon Radioisotopes
  • Carbon