A trimmed viral cap-independent translation enhancing sequence for rapid in vitro gene expression

Biotechnol Prog. 2000 May-Jun;16(3):517-21. doi: 10.1021/bp000021x.

Abstract

We prepared a short (29 nucleotides) 5' UTR that enhanced cap-independent translation in a wheat germ translation system by trimming the tobacco etch virus 5' UTR. The trimmed sequence, designated as TE(37-65), was obtained from a conserved region among several potyviruses. The productivities of uncapped reporter mRNAs carrying the TE(37-65) sequence were comparable to those of capped counterparts, in that 5-20 microg of proteins were synthesized per 1 mL of translation reaction mixture. The ribosome that entered onto the TE(37-65) sequence precisely initiated polypeptide synthesis at the defined initiation codon, which ensures rapid and efficient protein truncation analyses. Moreover, the TE(37-65) sequence is short enough to be involved in a PCR primer, which allows a simple method for rapid gene expression, i.e., PCR amplification of a target gene and succeeding in vitro transcription and translation. As a demonstration, the rapid in vitro expression of rice cDNAs using the TE(37-65) sequence was also performed.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • 5' Untranslated Regions
  • Base Sequence
  • DNA, Viral / genetics
  • Gene Expression*
  • Plant Viruses / genetics*
  • Plasmids
  • Protein Biosynthesis / genetics*
  • RNA Caps*
  • Sequence Homology, Amino Acid

Substances

  • 5' Untranslated Regions
  • DNA, Viral
  • RNA Caps