To determine the neural correlate of apparent motion perception, we measured magnetic responses to visual stimuli in apparent motion and compared the results with subjective rating of the quality of perceived motion with varied stimulus timing. The latency of the magnetic response was about 150 ms, and its origin was estimated to be in the occipito-parieto-temporal junction. The strength of the first component in the response varied with the stimulus timing, the maximum value being at the interval 0. The change could not be explained by the simple summation of onset and offset responses and this value was related to the subjective rating of quality (smoothness) of motion measured of the stimulus. Results indicate there is a localized cortical region of neural activity which is closely related to the subjective assessment of quality of perceived motion.